Carbohydrate-binding module

CBM_1
three-dimensional structures of three engineered cellulose-binding domains of cellobiohydrolase i from trichoderma reesei, nmr, 18 structures
Identifiers
SymbolCBM_1
PfamPF00734
Pfam clanCL0083
ECOD387.1.1
InterProIPR000254
PROSITEPDOC00486
SCOP21cel / SCOPe / SUPFAM
CAZyCBM1
Available protein structures:
PDB  IPR000254 PF00734 (ECOD; PDBsum)  
AlphaFold
CBM_2
solution structure of a cellulose binding domain from cellulomonas fimi by nuclear magnetic resonance spectroscopy
Identifiers
SymbolCBM_2
PfamPF00553
Pfam clanCL0203
ECOD11.1.5
InterProIPR001919
PROSITEPDOC00485
SCOP21exg / SCOPe / SUPFAM
CAZyCBM2
Available protein structures:
PDB  IPR001919 PF00553 (ECOD; PDBsum)  
AlphaFold
CBM_3
crystal structure of a family iiia cbd from clostridium cellulolyticum
Identifiers
SymbolCBM_3
PfamPF00942
Pfam clanCL0203
ECOD11.1.5
InterProIPR001956
SCOP21nbc / SCOPe / SUPFAM
CAZyCBM3
Available protein structures:
PDB  IPR001956 PF00942 (ECOD; PDBsum)  
AlphaFold
CBM_5/12
interactions of a family 18 chitinase with the designed inhibitor hm508, and its degradation product, chitobiono-delta-lactone
Identifiers
SymbolCBM_5_12
PfamPF02839
ECOD64.3.1
InterProIPR003610
SCOP21ed7 / SCOPe / SUPFAM
CAZyCBM12
Available protein structures:
PDB  IPR003610 PF02839 (ECOD; PDBsum)  
AlphaFold
CBM_6
cbm6ct from clostridium thermocellum in complex with xylopentaose
Identifiers
SymbolCBM_6
PfamPF03422
Pfam clanCL0202
ECOD10.32.1
InterProIPR005084
SCOP21gmm / SCOPe / SUPFAM
CAZyCBM6
Available protein structures:
PDB  IPR005084 PF03422 (ECOD; PDBsum)  
AlphaFold
CBM_4/9
cbm4 structure and function
Identifiers
SymbolCBM_4_9
PfamPF02018
Pfam clanCL0202
ECOD10.32.1
InterProIPR003305
SCOP21ulp / SCOPe / SUPFAM
CAZyCBM22
Available protein structures:
PDB  IPR003305 PF02018 (ECOD; PDBsum)  
AlphaFold
CBM_10
solution structure of type x cbm
Identifiers
SymbolCBM_10
PfamPF02013
ECOD908.1.1
InterProIPR002883
SCOP21qld / SCOPe / SUPFAM
CAZyCBM10
Available protein structures:
PDB  IPR002883 PF02013 (ECOD; PDBsum)  
AlphaFold
CBM_11
family 11 carbohydrate-binding module of cellulosomal cellulase lic26a-cel5e of clostridium thermocellum
Identifiers
SymbolCBM_11
PfamPF03425
Pfam clanCL0202
ECOD10.32.1
InterProIPR005087
CAZyCBM11
Available protein structures:
PDB  IPR005087 PF03425 (ECOD; PDBsum)  
AlphaFold
CBM_14
Identifiers
SymbolCBM_14
PfamPF01607
Pfam clanCL0155
ECOD394.1.1
InterProIPR002557
SCOP21dqc / SCOPe / SUPFAM
CAZyCBM14
Available protein structures:
PDB  IPR002557 PF01607 (ECOD; PDBsum)  
AlphaFold
CBM_15
xylan-binding module cbm15
Identifiers
SymbolCBM_15
PfamPF03426
Pfam clanCL0202
ECOD10.32.1
InterProIPR005088
SCOP21gny / SCOPe / SUPFAM
CAZyCBM15
Available protein structures:
PDB  IPR005088 PF03426 (ECOD; PDBsum)  
AlphaFold
CBM_17/28
structure of fam17 carbohydrate binding module from clostridium cellulovorans
Identifiers
SymbolCBM_17_28
PfamPF03424
Pfam clanCL0202
ECOD10.32.1
InterProIPR005086
SCOP21g0c / SCOPe / SUPFAM
CAZyCBM28
Available protein structures:
PDB  IPR005086 PF03424 (ECOD; PDBsum)  
AlphaFold
Chitin_bind_1 (CBM18)
crystal structure analysis of crosslinked-wga3/glcnacbeta1,4glcnac complex
Identifiers
SymbolChitin_bind_1
PfamPF00187
ECOD387.1.2
InterProIPR001002
PROSITEPDOC00025
SCOP21wgt / SCOPe / SUPFAM
CAZyCBM18
Available protein structures:
PDB  IPR001002 PF00187 (ECOD; PDBsum)  
AlphaFold
CBM_19
Identifiers
SymbolCBM_19
PfamPF03427
Pfam clanCL0155
InterProIPR005089
CAZyCBM19
Available protein structures:
PDB  IPR005089 PF03427 (ECOD; PDBsum)  
AlphaFold
CBM_20
glucoamylase, granular starch-binding domain complex with cyclodextrin, nmr, minimized average structure
Identifiers
SymbolCBM_20
PfamPF00686
Pfam clanCL0369
ECOD11.1.4
InterProIPR002044
SCOP21cdg / SCOPe / SUPFAM
CAZyCBM20
Available protein structures:
PDB  IPR002044 PF00686 (ECOD; PDBsum)  
AlphaFold
CBM_21
Identifiers
SymbolCBM_21
PfamPF03370
ECOD11.1.1
InterProIPR005036
CAZyCBM21
Available protein structures:
PDB  IPR005036 PF03370 (ECOD; PDBsum)  
AlphaFold
CBM_25
Identifiers
SymbolCBM_25
PfamPF03423
ECOD11.1.4
InterProIPR005085
CAZyCBM25
Available protein structures:
PDB  IPR005085 PF03423 (ECOD; PDBsum)  
AlphaFold
CBM27
structural and thermodynamic dissection of specific mannan recognition by a carbohydrate-binding module, tmcbm27
Identifiers
SymbolCBM27
PfamPF09212
ECOD10.32.1
InterProIPR015295
SCOP21oh4 / SCOPe / SUPFAM
Available protein structures:
PDB  IPR015295 PF09212 (ECOD; PDBsum)  
AlphaFold
Chitin_bind_3 (CBM33)
crystal structure of the serratia marcescens chitin-binding protein cbp21 y54a mutant.
Identifiers
SymbolChitin_bind_3
PfamPF03067
Pfam clanCL0159
ECOD11.1.1
InterProIPR004302
CAZyCBM33
Available protein structures:
PDB  IPR004302 PF03067 (ECOD; PDBsum)  
AlphaFold
CBM_48
crystal structure of glycosyltrehalose trehalohydrolase from sulfolobus solfataricus
Identifiers
SymbolCBM_48
PfamPF02922
Pfam clanCL0369
ECOD11.1.1
InterProIPR004193
SCOP21bf2 / SCOPe / SUPFAM
CAZyCBM48
Available protein structures:
PDB  IPR004193 PF02922 (ECOD; PDBsum)  
AlphaFold
CBM49
Identifiers
SymbolCBM49
PfamPF09478
Pfam clanCL0203
InterProIPR019028
Available protein structures:
PDB  IPR019028 PF09478 (ECOD; PDBsum)  
AlphaFold

In molecular biology, a carbohydrate-binding module (CBM) is a protein domain found in carbohydrate-active enzymes (for example glycoside hydrolases). The majority of these domains have carbohydrate-binding activity. Some of these domains are found on cellulosomal scaffoldin proteins. CBMs were previously known as cellulose-binding domains. CBMs are classified into numerous families, based on amino acid sequence similarity. There are currently (June 2011) 64 families of CBM in the CAZy database.

CBMs of microbial glycoside hydrolases play a central role in the recycling of photosynthetically fixed carbon through their binding to specific plant structural polysaccharides. CBMs can recognise both crystalline and amorphous cellulose forms. CBMs are the most common non-catalytic modules associated with enzymes active in plant cell-wall hydrolysis. Many putative CBMs have been identified by amino acid sequence alignments but only a few representatives have been shown experimentally to have a carbohydrate-binding function.